dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000652_18|CGC1
Gene ID: MGYG000000652_01932
Location and strand information: 2327 - 3736 (-)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1954
Protein molecular weight: 53239.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000652_18|CGC1
Gene ID: MGYG000000652_01933
Location and strand information: 3776 - 5671 (-)
Family: PL11_1|CBM2|PL11|CBM35
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.1278
Protein molecular weight: 69964.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000652_18|CGC1
Gene ID: MGYG000000652_01934
Location and strand information: 5697 - 8033 (-)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1596
Protein molecular weight: 89293.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000652_18|CGC1
Gene ID: MGYG000000652_01935
Location and strand information: 8072 - 11356 (-)
Family: PL26
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7807
Protein molecular weight: 124790.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000652_18|CGC1
Gene ID: MGYG000000652_01936
Location and strand information: 11385 - 13025 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.6861
Protein molecular weight: 61220.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000652_18|CGC1
Gene ID: MGYG000000652_01937
Location and strand information: 13126 - 14985 (-)
Family: PL11|CBM35|PL11_1|CBM13|CBM2
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 4.7133
Protein molecular weight: 68398.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000652_18|CGC1
Gene ID: MGYG000000652_01938
Location and strand information: 14988 - 17993 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.4088
Protein molecular weight: 114288.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000652_18|CGC1
Gene ID: MGYG000000652_01939
Location and strand information: 18015 - 19349 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000652_18|CGC1
Gene ID: MGYG000000652_01940
Location and strand information: 19701 - 22595 (-)
Family: GH2
Protein type: CAZyme
Protein description: Evolved beta-galactosidase subunit alpha
Protein isoelectric point: 5.9731
Protein molecular weight: 108597.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000652_18|CGC1
Gene ID: MGYG000000652_01941
Location and strand information: 22685 - 24154 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000652_18|CGC1
Gene ID: MGYG000000652_01942
Location and strand information: 24210 - 25448 (-)
Family: GH43_10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7704
Protein molecular weight: 47519.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000652_18|CGC1
Gene ID: MGYG000000652_01943
Location and strand information: 26265 - 28379 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000652_18|CGC1
Gene ID: MGYG000000652_01944
Location and strand information: 28415 - 31558 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000652_18|CGC1
Gene ID: MGYG000000652_01945
Location and strand information: 31994 - 33127 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3603
Protein molecular weight: 43946.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000652_01932	GH105_e35\|3.2.1.172	pectin
MGYG000000652_01933	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin
MGYG000000652_01934	GH115_e1\|3.2.1.-	arabinogalactan
MGYG000000652_01935	PL26_e1\|4.2.2.24	pectin
MGYG000000652_01936	CE12_e40
MGYG000000652_01937	PL11_e0\|CBM35_e56\|CBM2_e72\|CBM13_e93\|4.2.2.23	pectin
MGYG000000652_01938	GH2_e11\|3.2.1.31	beta-glucuronan
MGYG000000652_01940	GH2_e89\|3.2.1.23	beta-galactan
MGYG000000652_01942
MGYG000000652_01945	GH105_e14\|3.2.1.172	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000652_01932	hypothetical protein	CAZyme	2327	3736	-	GH105
MGYG000000652_01933	Rhamnogalacturonan endolyase YesW	CAZyme	3776	5671	-	PL11_1\| CBM2\| PL11\| CBM35
MGYG000000652_01934	hypothetical protein	CAZyme	5697	8033	-	GH115
MGYG000000652_01935	hypothetical protein	CAZyme	8072	11356	-	PL26
MGYG000000652_01936	hypothetical protein	CAZyme	11385	13025	-	CE12
MGYG000000652_01937	Rhamnogalacturonan endolyase YesW	CAZyme	13126	14985	-	PL11\| CBM35\| PL11_1\| CBM13\| CBM2
MGYG000000652_01938	Beta-galactosidase	CAZyme	14988	17993	-	GH2
MGYG000000652_01939	hypothetical protein	null	18015	19349	-	PD40\| PD40
MGYG000000652_01940	Evolved beta-galactosidase subunit alpha	CAZyme	19701	22595	-	GH2
MGYG000000652_01941	hypothetical protein	null	22685	24154	-	SASA
MGYG000000652_01942	hypothetical protein	CAZyme	24210	25448	-	GH43_10
MGYG000000652_01943	hypothetical protein	null	26265	28379	-	SusD-like_3\| SusD_RagB
MGYG000000652_01944	TonB-dependent receptor SusC	TC	28415	31558	-	1.B.14.6.1
MGYG000000652_01945	hypothetical protein	CAZyme	31994	33127	+	GH105
Protein ID	Protein Name	Type	Start	End	Strand	Signature